Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-539 in MPM Mesothelioma Gordon Cluster 42 Table contains all genes in the MPM Mesothelioma Gordon cluster number 42. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-539 55207 ARL8B ADP-ribosylation factor-like 8B [Source:HGNC Symbol;Acc:25564] P T 23199 KIAA0182 KIAA0182 [Source:HGNC Symbol;Acc:28979] T 9469 CHST3 carbohydrate (chondroitin 6) sulfotransferase 3 [Source:HGNC Symbol;Acc:1971] T 26031 OSBPL3 oxysterol binding protein-like 3 [Source:HGNC Symbol;Acc:16370] T 7162 TPBG trophoblast glycoprotein [Source:HGNC Symbol;Acc:12004] zzz999 25818 KLK5 kallikrein-related peptidase 5 [Source:HGNC Symbol;Acc:6366] zzz999 64393 ZMAT3 zinc finger, matrin-type 3 [Source:HGNC Symbol;Acc:29983] zzz999 56925 LXN latexin [Source:HGNC Symbol;Acc:13347] zzz999 1288 COL4A6 collagen, type IV, alpha 6 [Source:HGNC Symbol;Acc:2208] T 201562 PTPLB protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b [Source:HGNC Symbol;Acc:9640] zzz999 1135 CHRNA2 cholinergic receptor, nicotinic, alpha 2 (neuronal) [Source:HGNC Symbol;Acc:1956] zzz999 10874 NMU neuromedin U [Source:HGNC Symbol;Acc:7859] zzz999 27342 RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 [Source:HGNC Symbol;Acc:17676] T 9052 GPRC5A G protein-coupled receptor, family C, group 5, member A [Source:HGNC Symbol;Acc:9836] zzz999 53836 GPR87 G protein-coupled receptor 87 [Source:HGNC Symbol;Acc:4538] zzz999 51599 LSR lipolysis stimulated lipoprotein receptor [Source:HGNC Symbol;Acc:29572] zzz999 10101 NUBP2 nucleotide binding protein 2 (MinD homolog, E. coli) [Source:HGNC Symbol;Acc:8042] zzz999 1020 CDK5 cyclin-dependent kinase 5 [Source:HGNC Symbol;Acc:1774] T 55833 UBAP2 ubiquitin associated protein 2 [Source:HGNC Symbol;Acc:14185] zzz999 6158 RPL28 ribosomal protein L28 [Source:HGNC Symbol;Acc:10330] T 4241 MFI2 antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5 [Source:HGNC Symbol;Acc:7037] zzz999 10776 ARPP19 cAMP-regulated phosphoprotein, 19kDa [Source:HGNC Symbol;Acc:16967] P T 51809 GALNT7 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7) [Source:HGNC Symbol;Acc:4129] P T 3710 ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 [Source:HGNC Symbol;Acc:6182] zzz999 10653 SPINT2 serine peptidase inhibitor, Kunitz type, 2 [Source:HGNC Symbol;Acc:11247] T 51094 ADIPOR1 adiponectin receptor 1 [Source:HGNC Symbol;Acc:24040] zzz999 5362 PLXNA2 plexin A2 [Source:HGNC Symbol;Acc:9100] T 6868 ADAM17 ADAM metallopeptidase domain 17 [Source:HGNC Symbol;Acc:195] zzz999 51762 RAB8B RAB8B, member RAS oncogene family [Source:HGNC Symbol;Acc:30273] T 3918 LAMC2 laminin, gamma 2 [Source:HGNC Symbol;Acc:6493] T 8853 ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:2721] T 22911 WDR47 WD repeat domain 47 [Source:HGNC Symbol;Acc:29141] zzz999 1525 CXADR coxsackie virus and adenovirus receptor [Source:HGNC Symbol;Acc:2559] zzz999 5932 RBBP8 retinoblastoma binding protein 8 [Source:HGNC Symbol;Acc:9891] zzz999 7430 EZR ezrin [Source:HGNC Symbol;Acc:12691] zzz999 54566 EPB41L4B erythrocyte membrane protein band 4.1 like 4B [Source:HGNC Symbol;Acc:19818] T 27173 SLC39A1 solute carrier family 39 (zinc transporter), member 1 [Source:HGNC Symbol;Acc:12876] T 79669 C3orf52 chromosome 3 open reading frame 52 [Source:HGNC Symbol;Acc:26255] T 55227 LRRC1 leucine rich repeat containing 1 [Source:HGNC Symbol;Acc:14307] zzz999 8727 CTNNAL1 catenin (cadherin-associated protein), alpha-like 1 [Source:HGNC Symbol;Acc:2512] zzz999 4324 MMP15 matrix metallopeptidase 15 (membrane-inserted) [Source:HGNC Symbol;Acc:7161] zzz999 4690 NCK1 NCK adaptor protein 1 [Source:HGNC Symbol;Acc:7664] zzz999 79672 FN3KRP fructosamine 3 kinase related protein [Source:HGNC Symbol;Acc:25700] zzz999 81631 MAP1LC3B microtubule-associated protein 1 light chain 3 beta [Source:HGNC Symbol;Acc:13352] T 3855 KRT7 keratin 7 [Source:HGNC Symbol;Acc:6445] zzz999 8200 GDF5 growth differentiation factor 5 [Source:HGNC Symbol;Acc:4220] T 7045 TGFBI transforming growth factor, beta-induced, 68kDa [Source:HGNC Symbol;Acc:11771] T 3400 ID4 inhibitor of DNA binding 4, dominant negative helix-loop-helix protein [Source:HGNC Symbol;Acc:5363] P T 25792 CIZ1 CDKN1A interacting zinc finger protein 1 [Source:HGNC Symbol;Acc:16744] zzz999 6687 SPG7 spastic paraplegia 7 (pure and complicated autosomal recessive) [Source:HGNC Symbol;Acc:11237] zzz999 7378 UPP1 uridine phosphorylase 1 [Source:HGNC Symbol;Acc:12576] zzz999 7979 SHFM1 split hand/foot malformation (ectrodactyly) type 1 [Source:HGNC Symbol;Acc:10845] zzz999 23608 MKRN1 makorin ring finger protein 1 [Source:HGNC Symbol;Acc:7112] zzz999 9690 UBE3C ubiquitin protein ligase E3C [Source:HGNC Symbol;Acc:16803] T 51706 CYB5R1 cytochrome b5 reductase 1 [Source:HGNC Symbol;Acc:13397] zzz999 1861 TOR1A torsin family 1, member A (torsin A) [Source:HGNC Symbol;Acc:3098] zzz999 25816 TNFAIP8 tumor necrosis factor, alpha-induced protein 8 [Source:HGNC Symbol;Acc:17260] T 51200 CPA4 carboxypeptidase A4 [Source:HGNC Symbol;Acc:15740] T 23071 ERP44 endoplasmic reticulum protein 44 [Source:HGNC Symbol;Acc:18311] P T 1009 CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) [Source:HGNC Symbol;Acc:1750] T 57157 PHTF2 putative homeodomain transcription factor 2 [Source:HGNC Symbol;Acc:13411] T 8761 PABPC4 poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:HGNC Symbol;Acc:8557] zzz999 10095 ARPC1B actin related protein 2/3 complex, subunit 1B, 41kDa [Source:HGNC Symbol;Acc:704] zzz999 51659 GINS2 GINS complex subunit 2 (Psf2 homolog) [Source:HGNC Symbol;Acc:24575] zzz999 2318 FLNC filamin C, gamma [Source:HGNC Symbol;Acc:3756] T 55357 TBC1D2 TBC1 domain family, member 2 [Source:HGNC Symbol;Acc:18026] zzz999 29108 PYCARD PYD and CARD domain containing [Source:HGNC Symbol;Acc:16608] zzz999 2806 GOT2 glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2) [Source:HGNC Symbol;Acc:4433] T 3487 IGFBP4 insulin-like growth factor binding protein 4 [Source:HGNC Symbol;Acc:5473] T 147407 MCART2 mitochondrial carrier triple repeat 2 [Source:HGNC Symbol;Acc:23324] zzz999 93129 ORAI3 ORAI calcium release-activated calcium modulator 3 [Source:HGNC Symbol;Acc:28185] zzz999 6574 SLC20A1 solute carrier family 20 (phosphate transporter), member 1 [Source:HGNC Symbol;Acc:10946] P T 5329 PLAUR plasminogen activator, urokinase receptor [Source:HGNC Symbol;Acc:9053] zzz999 2621 GAS6 growth arrest-specific 6 [Source:HGNC Symbol;Acc:4168] zzz999 10272 FSTL3 follistatin-like 3 (secreted glycoprotein) [Source:HGNC Symbol;Acc:3973] T 23787 MTCH1 mitochondrial carrier homolog 1 (C. elegans) [Source:HGNC Symbol;Acc:17586] T 624 BDKRB2 bradykinin receptor B2 [Source:HGNC Symbol;Acc:1030] zzz999 3556 IL1RAP interleukin 1 receptor accessory protein [Source:HGNC Symbol;Acc:5995] T 51330 TNFRSF12A tumor necrosis factor receptor superfamily, member 12A [Source:HGNC Symbol;Acc:18152] zzz999 27348 TOR1B torsin family 1, member B (torsin B) [Source:HGNC Symbol;Acc:11995] T 64866 CDCP1 CUB domain containing protein 1 [Source:HGNC Symbol;Acc:24357] T 10460 TACC3 transforming, acidic coiled-coil containing protein 3 [Source:HGNC Symbol;Acc:11524] zzz999 9551 ATP5J2 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2 [Source:HGNC Symbol;Acc:848] zzz999 218 ALDH3A1 aldehyde dehydrogenase 3 family, member A1 [Source:HGNC Symbol;Acc:405] zzz999 25994 HIGD1A HIG1 hypoxia inducible domain family, member 1A [Source:HGNC Symbol;Acc:29527] zzz999 55665 URGCP upregulator of cell proliferation [Source:HGNC Symbol;Acc:30890] zzz999 23108 RAP1GAP2 RAP1 GTPase activating protein 2 [Source:HGNC Symbol;Acc:29176] T 8407 TAGLN2 transgelin 2 [Source:HGNC Symbol;Acc:11554] zzz999 10687 PNMA2 paraneoplastic antigen MA2 [Source:HGNC Symbol;Acc:9159] T 5352 PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:9082] zzz999 9562 MINPP1 multiple inositol-polyphosphate phosphatase 1 [Source:HGNC Symbol;Acc:7102] zzz999 56548 CHST7 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 [Source:HGNC Symbol;Acc:13817] zzz999 84272 YIPF4 Yip1 domain family, member 4 [Source:HGNC Symbol;Acc:28145] zzz999 23008 KLHDC10 kelch domain containing 10 [Source:HGNC Symbol;Acc:22194] T 51351 ZNF117 zinc finger protein 117 [Source:HGNC Symbol;Acc:12897] T 51547 SIRT7 sirtuin 7 [Source:HGNC Symbol;Acc:14935] zzz999 79042 TSEN34 tRNA splicing endonuclease 34 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:15506] zzz999 55069 C7orf42 chromosome 7 open reading frame 42 [Source:HGNC Symbol;Acc:25476] zzz999 1857 DVL3 dishevelled, dsh homolog 3 (Drosophila) [Source:HGNC Symbol;Acc:3087] T 27032 ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 [Source:HGNC Symbol;Acc:13211] zzz999 84859 LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 [Source:HGNC Symbol;Acc:28637] zzz999

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